Benthos, plankton, macrophytes - who's who in an aquatic ecosystem

Knowledge base · July 23, 2026

In limnology and water assessment, words keep coming up: plankton, benthos, macrophytes, periphyton. They sound scholarly, but they simply mean groups of organisms divided according to where and how they live in the water. This short guide sorts out who is who - and why it matters for quality indicators.

Plankton - suspended in the water column

Organisms floating in the water, carried by its movement:

  • phytoplankton - microscopic algae (including cyanobacteria); their biomass is described by chlorophyll-a, and an excess means blooms,
  • zooplankton - tiny animals (e.g. rotifers, planktonic crustaceans) feeding on phytoplankton.

Benthos - life on the bottom

Organisms bound to the bottom. In water assessment the key ones are the benthic macroinvertebrates (insect larvae, molluscs, crustaceans), which are an excellent bioindicator - see bioindication with macroinvertebrates.

Periphyton - coatings on substrates

A thin layer of algae and micro-organisms growing on stones, plants and other surfaces. It includes, among others, diatoms (phytobenthos), used in the assessment of rivers.

Macrophytes - aquatic plants

Larger plants: submerged, with floating leaves, and emergent. Their composition and cover are a biological indicator of status - see mapping macrophytes.

Nekton - active swimmers

Organisms that move independently of the current - above all fish (ichthyofauna), also an element of status assessment (fish monitoring).

GroupWhere it livesExamplesRole in indicators
Phytoplanktonsuspended in the water columnsingle-celled algae, including cyanobacteriabiomass described by chlorophyll-a; an excess is a bloom
Zooplanktonsuspended in the water columnrotifers, planktonic crustaceans (copepods, cladocerans)feeds on phytoplankton; a link in the food web
Benthoson and in the bottommacroinvertebrates (insect larvae, molluscs, crustaceans)bioindicator in biotic indices - see bioindication
Periphyton (phytobenthos)coatings on stones, plants and the bottomdiatoms and other attached algaeused in assessing the status of rivers (diatom indices)
Macrophytesrooted or free-floating higher plantssubmerged, floating-leaved, emergentcomposition and cover are a biological indicator - see macrophyte mapping
Nektonswims actively, independently of the currentfish (ichthyofauna)an element of status assessment - see fish monitoring

The distinction plankton vs benthos vs periphyton is not a matter of species but of way of life: the same algal taxon may be planktonic (suspended) or periphytic (attached) - what decides is where and how it lives at a given moment, not the name of the group.

What this division is for

Because different groups respond differently to conditions and reflect them on different time scales - which is why the assessment of ecological status relies on several of them at once (see elements of assessment).

In practice

Biological data is usually lists of species and abundances - which can also be kept systematically. In LimnoLog you record them as custom indicators, alongside physico-chemical measurements, in a single project.

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